| Author | Pubmed_ID | Title | Journal | Year | Comments |
|---|
| Kearney, Patro et al. | 38226493  | Transcriptionally-active "defective" HIV-1 proviruses and their association with immunological non-response to antiretroviral therapy | JID | 2024 | |
| Imamichi, Singh et al. | 37555786 | Long-term persistence of transcriptionally active defective HIV-1 proviruses: implications for persistent immune activation during antiretroviral therapy | AIDS | 2023 | PSD only contains proviral DNA, not RNA from this paper |
| Simonetti, White et al. | 36602866 | Clonally expanded HIV-1 proviruses with 5prime-leader defects can give rise to nonsuppressible residual viremia | JCI | 2023 | |
| Mellors, Joseph et al. | 35674431 | Deep Sequencing Analysis of Individual HIV-1 Proviruses Reveals Frequent Asymmetric Long Terminal Repeats | JVI | 2022 | DOI: 10.1128/jvi.00122-22 |
| Mellors, Halvas et al. | 33016926 | HIV-1 viremia not suppressible by antiretroviral therapy can originate from large T cell clones producing infectious virus | JCI | 2020 | |
| Palmer, Horsburgh et al. | 31913161 | High levels of genetically-intact HIV in HLA-DR+ memory T-cells indicates their value for reservoir studies | AIDS | 2020 | |
| Siliciano, Antar et al. | 32191639 | Longitudinal Study Reveals HIV-1-infected CD4+ T Cell Dynamics During Long-Term Antiretroviral Therapy | JCI | 2020 | |
| van Zyl, Katusiime et al. | 31776265 | Intact HIV Proviruses Persist in Children Seven to Nine Years After Initiation of Antiretroviral Therapy in the First Year of Life | J Virol | 2020 | |
| Kearney, Patro et al. | 31776247 | Combined Near Full-Length HIV-1 Sequencing and Integration Site Analysis Informs Intra-Patient Viral Dynamics and Reconstruction of Replication-Com
petent Viral Ancestors | PNAS | 2019 | |
| Nussenzweig, Gaebler et al. | 31350309 | Combination of quadruplex qPCR and next-generation sequencing for qualitative and quantitative analysis of the HIV-1 latent reservoir | JEM | 2019 | |
| Jankovic, Lu et al. | 30420517 | Relationship between intact HIV-1 proviruses in circulating CD4+ T cells and rebound viruses emerging during treatment interruption | PNAS | 2018 | |
| Palmer, Hiener et al. | 29045846 | Identification of Genetically Intact HIV-1 Proviruses in Specific CD4+ T Cells from Effectively Treated Participants | Cell Reports | 2017 | patient characteristics are from Horsburgh, et. al. 2020, AIDS (pubmed 31913161), same patients |
| Siliciano, Bruner et al. | 27500724 | Defective proviruses rapidly accumulate during acute HIV-1 infection | Nat_Med | 2016 | |
| Siliciano, Ho et al. | 24243014 | Replication-competent noninduced proviruses in the latent reservoir increase barrier to HIV-1 cure. | Cell | 2013 | |